%%
%% Document Setup
%% 
% Declare Document Class
\documentclass{article}
% Import OHSU dissertation style
\usepackage{styling/ohsu-dissertation}
% For formatting reasons, we input the list of abbreviations
% (i.e. glossary) section outside of the document
\makeglossaries
\input{sections/glossary}
%%
%% Define Text Variables
%%
% This is where you write in the details
% of your project, institution, etc.
\newcommand{\projecttitle}{Your Dissertation Title}
\newcommand{\projectauthor}{Your Name}
\newcommand{\department}{Your Department}
\newcommand{\institution}{Oregon Health \& Science University}
\newcommand{\school}{Your school (e.g. School of Medicine)}
\newcommand{\degreelong}{Long form name of your degree}
\newcommand{\degreeshort}{Short form name of your degree (i.e. the letters)}
\newcommand{\track}{Your Program Track}
\newcommand{\completionmonth}{Completion Month}
\newcommand{\completionyear}{Completion Year}
\newcommand{\advisor}{Name of Your Advisor}
\newcommand{\chair}{Name of Your Committee Chair}
\newcommand{\memberthree}{Name of Committee Member 3}
\newcommand{\memberfour}{Name of Committee Member 4}
\newcommand{\memberfive}{Name of Committee Member 5}
%%
%% Document Structure
%%
\begin{document}
    \include{sections/preamble}
    \pagenumbering{roman}
    \clearpage
    
    \tableofcontents
    \clearpage
    
    \include{sections/abstract}
    \clearpage
    
    \include{sections/dedication}
    \clearpage
    
    \listoffigures
    \clearpage
    
    \listoftables
    \clearpage
    
    % Generate List of Abbreviations
    \setglossarystyle{listgroup}
    \printglossary[type=\acronymtype,title={List of Abbreviations},toctitle=List of Abbreviations] 
    \clearpage
    
    \include{sections/introduction}
    \clearpage
    
    \include{sections/background}
    \clearpage
    
    \include{sections/aim-1}
    \clearpage
    
    \include{sections/aim-2}
    \clearpage
    
    \include{sections/aim-3}
    \clearpage
    
    \include{sections/discussion}
    \clearpage
    
    \include{sections/conclusion}
    \clearpage
    
    \bibliographystyle{alpha}
    \bibliography{references}
    \clearpage
    
    \include{sections/appendix}
    \clearpage
\end{document}